Skip to content

Pull requests: OpenMS/OpenMS

New pull request New
52 Open 5,571 Closed
52 Open 5,571 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

MapAlignerPoseClustering: skip un-alignable files instead of crashing (fixes #7010)
#9455 opened Jun 7, 2026 by timosachsenberg Contributor Loading…
3 tasks done
1
5
GSoC 2026: imzML Parser in OpenMS new contributor
#9454 opened Jun 6, 2026 by Aditya-Sarna Loading…
5 tasks done
25
feat: Native PeptDeep RT and MS2 ONNX Inference Bindings
#9453 opened Jun 6, 2026 by satyam102006 Contributor • Draft
7
replace String with std::string
#9450 opened Jun 4, 2026 by cbielow Contributor • Draft
5 tasks
3
feat(TMT32/35): ship Thermo CoA isotope correction matrices
#9446 opened Jun 4, 2026 by timosachsenberg Contributor Loading…
6
pytorch
#9426 opened Jun 1, 2026 by timosachsenberg Contributor • Draft
5 tasks
8
feat(ProSE): DIA precursor search via MS1-derived candidates
#9411 opened May 28, 2026 by timosachsenberg Contributor • Draft
4 of 7 tasks
3
Added new classes for temporary file handling and applied it to solve issues in TOPPView
#9285 opened May 11, 2026 by TilBln Contributor Loading…
5 tasks done
55
[FEATURE] Remote XML loading (S3, HTTP/FTP) — experimental
#9262 opened May 4, 2026 by Copilot AI Loading…
@jpfeuffer
9
TextExporter: document USI export
#9173 opened Apr 17, 2026 by Adi-gitX Contributor Loading…
2 of 5 tasks
5
docs: mention OpenMP requirement for clang builds new contributor
#9162 opened Apr 16, 2026 by Adi-gitX Contributor Loading…
1
7
WIP (feat,osw): Evidence Based (Insilico) Transition List Filter
#9161 opened Apr 16, 2026 by singjc Contributor • Draft
5 tasks
3
Remove duplicate Comet score metavalues in PepXMLFile parser
#9089 opened Apr 6, 2026 by Copilot AI • Draft
1
@jpfeuffer
pixi build
#9066 opened Apr 2, 2026 by jpfeuffer Contributor • Draft
5
Add BedRMod format support and enhance NucleicAcidSearchEngine
#9055 opened Apr 1, 2026 by poshul Collaborator • Draft
7 of 9 tasks
25
Fix FLASHDeconv negative mass/charge handling and TOPPAS file type detection
#9054 opened Apr 1, 2026 by poshul Collaborator • Draft
1 of 3 tasks
6
Build system and devcontainer improvements
#9053 opened Apr 1, 2026 by poshul Collaborator • Draft
2 of 4 tasks
18
docs(vcpkg): add Windows verification report and fixes for vcpkg inte…
#9044 opened Mar 31, 2026 by Aditya-9215 Loading…
1
19
perf: replace nested OMP loops with flat work queue in OpenSwathWork…
#9027 opened Mar 28, 2026 by yuvraj-coder1 Contributor Loading…
3 of 5 tasks
@pjones @singjc @jcharkow
4
feat: stream Bruker DIA-PASEF data frame-by-frame for constant memory usage
#9025 opened Mar 27, 2026 by timosachsenberg Contributor Loading…
5
Fix TODO: Avoid huge restriction lists for modification parameters
#8969 opened Mar 22, 2026 by ronak-15 Contributor Loading…
@cbielow
9
fix: filter subsumable (prob=0) proteins in ProtXMLFile parser
#8960 opened Mar 20, 2026 by timosachsenberg Contributor Loading…
1 of 3 tasks
1
1
Add bedrmod
#8906 opened Mar 15, 2026 by poshul Collaborator • Draft
5 tasks
1
feat: implement layer-ordered heap for FDR sorting (#5160)
#8904 opened Mar 14, 2026 by AsciiHermit Loading…
5 tasks done
9
Build: Add vcpkg-configuration.json to establish registry baseline for reproducible builds
#8903 opened Mar 13, 2026 by krrishverma1805-web Contributor Loading…
2 tasks done
9
ProTip! Updated in the last three days: updated:>2026-06-05.